Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 AC008267.7-201ENST00000624570 1194 ntBASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 AC068587.6-202ENST00000641839 5619 ntBASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
BRMS1Q9HCU9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 MIR648-201ENST00000385046 94 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 BX842568.4-201ENST00000421222 227 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 ADH5P3-201ENST00000433842 1137 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 AC005829.1-201ENST00000570002 483 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 MIR3687-2-201ENST00000577708 61 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 AC073389.1-201ENST00000595595 795 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 MIR3687-1-201ENST00000614492 61 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 AL589702.1-201ENST00000641229 1509 ntBASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRMS1Q9HCU9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 TIMM8BP1-201ENST00000452384 211 ntBASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 IGHV3-62-201ENST00000520057 340 ntBASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 AC027307.2-201ENST00000591252 911 ntBASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
BRMS1Q9HCU9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRMS1Q9HCU9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.77■□□□□ 0.6
BRMS1Q9HCU9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRMS1Q9HCU9 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRMS1Q9HCU9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRMS1Q9HCU9 ELL2P1-201ENST00000413990 1906 ntBASIC18.77■□□□□ 0.6
BRMS1Q9HCU9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRMS1Q9HCU9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms