Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 AL596087.1-201ENST00000400979 1969 ntBASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC68Q9H2F9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 AL161772.1-201ENST00000610494 4412 ntBASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 AC034105.1-201ENST00000563488 319 ntBASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 IL9RP2-201ENST00000423948 1312 ntBASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 LINC02199-201ENST00000506655 2702 ntBASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC68Q9H2F9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AC005622.1-201ENST00000636801 1703 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 HYMAI-201ENST00000635591 3347 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AL365209.1-201ENST00000624418 6473 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 REXO1L8P-201ENST00000604378 1897 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AC007967.2-201ENST00000432613 625 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 KRT18P34-201ENST00000488218 1270 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AC109635.5-201ENST00000533593 962 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AL121894.2-201ENST00000602977 491 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AL009183.1-201ENST00000603760 355 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 AC004877.2-201ENST00000623941 599 ntBASIC16.36■□□□□ 0.21
CCDC68Q9H2F9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms