Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 AC243562.1-201ENST00000560672 389 ntBASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 LINC01225-203ENST00000563550 1244 ntBASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RSPO3Q9BXY4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AL691432.1-201ENST00000596308 1422 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AC023274.1-201ENST00000418278 595 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 KRT18P3-201ENST00000451602 1288 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 MIR4313-201ENST00000580760 101 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AL161645.1-201ENST00000622716 1255 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AL136982.4-201ENST00000437689 1740 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AL109954.1-202ENST00000564051 2148 ntBASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RSPO3Q9BXY4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AC112693.3-201ENST00000624819 1983 ntBASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AC138035.3-201ENST00000622706 2791 ntBASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AC002056.1-201ENST00000395613 760 ntBASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 RARRES2P8-201ENST00000566335 367 ntBASIC14.85□□□□□ -0.03
RSPO3Q9BXY4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms