Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
VGLL1Q99990 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.39□□□□□ -0.43
VGLL1Q99990 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.39□□□□□ -0.43
VGLL1Q99990 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
VGLL1Q99990 SCARNA2-201ENST00000458748 420 ntBASIC12.39□□□□□ -0.43
VGLL1Q99990 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.39□□□□□ -0.43
VGLL1Q99990 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 AC005412.3-201ENST00000580309 715 ntBASIC12.39□□□□□ -0.43
VGLL1Q99990 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.39□□□□□ -0.43
VGLL1Q99990 AC025062.2-201ENST00000605477 670 ntBASIC12.39□□□□□ -0.43
VGLL1Q99990 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 AL121772.3-201ENST00000610840 674 ntBASIC12.39□□□□□ -0.43
VGLL1Q99990 AC020765.3-201ENST00000613051 740 ntBASIC12.39□□□□□ -0.43
VGLL1Q99990 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.39□□□□□ -0.43
VGLL1Q99990 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
VGLL1Q99990 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.39□□□□□ -0.43
VGLL1Q99990 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VGLL1Q99990 AC073347.1-201ENST00000421633 2643 ntBASIC12.39□□□□□ -0.43
VGLL1Q99990 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.39□□□□□ -0.43
VGLL1Q99990 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.38□□□□□ -0.43
VGLL1Q99990 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.38□□□□□ -0.43
VGLL1Q99990 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.38□□□□□ -0.43
VGLL1Q99990 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.38□□□□□ -0.43
VGLL1Q99990 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.38□□□□□ -0.43
VGLL1Q99990 RPS15P9-201ENST00000494093 319 ntBASIC12.38□□□□□ -0.43
VGLL1Q99990 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 AC021087.4-201ENST00000563761 564 ntBASIC12.38□□□□□ -0.43
VGLL1Q99990 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 AC006557.2-201ENST00000592985 1240 ntBASIC12.38□□□□□ -0.43
VGLL1Q99990 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
VGLL1Q99990 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
VGLL1Q99990 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VGLL1Q99990 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms