Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.44□□□□□ -0.1
VRK1Q99986 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.44□□□□□ -0.1
VRK1Q99986 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.44□□□□□ -0.1
VRK1Q99986 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VRK1Q99986 AC093525.9-201ENST00000624961 1746 ntBASIC14.44□□□□□ -0.1
VRK1Q99986 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VRK1Q99986 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.43□□□□□ -0.1
VRK1Q99986 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 MIR600HG-201ENST00000449175 5984 ntBASIC14.43□□□□□ -0.1
VRK1Q99986 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VRK1Q99986 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.43□□□□□ -0.1
VRK1Q99986 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.43□□□□□ -0.1
VRK1Q99986 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VRK1Q99986 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 AC092919.2-201ENST00000623631 1645 ntBASIC14.43□□□□□ -0.1
VRK1Q99986 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.43□□□□□ -0.1
VRK1Q99986 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.43□□□□□ -0.1
VRK1Q99986 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
VRK1Q99986 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.43□□□□□ -0.1
VRK1Q99986 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VRK1Q99986 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VRK1Q99986 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
VRK1Q99986 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.42□□□□□ -0.1
VRK1Q99986 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.42□□□□□ -0.1
VRK1Q99986 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 AL365203.3-201ENST00000609742 2057 ntBASIC14.42□□□□□ -0.1
VRK1Q99986 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.42□□□□□ -0.1
VRK1Q99986 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
VRK1Q99986 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
VRK1Q99986 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.42□□□□□ -0.1
VRK1Q99986 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 AC124947.2-201ENST00000547118 1133 ntBASIC14.42□□□□□ -0.1
VRK1Q99986 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 AL645728.2-201ENST00000641974 660 ntBASIC14.42□□□□□ -0.1
VRK1Q99986 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.42□□□□□ -0.1
VRK1Q99986 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.42□□□□□ -0.1
VRK1Q99986 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
VRK1Q99986 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
VRK1Q99986 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms