Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE1Q99829 AC007064.4-201ENST00000637740 555 ntBASIC16.26■□□□□ 0.19
CPNE1Q99829 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.26■□□□□ 0.19
CPNE1Q99829 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CPNE1Q99829 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE1Q99829 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.25■□□□□ 0.19
CPNE1Q99829 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 RNA5SP415-201ENST00000517246 115 ntBASIC16.25■□□□□ 0.19
CPNE1Q99829 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.25■□□□□ 0.19
CPNE1Q99829 AC104692.2-201ENST00000603054 253 ntBASIC16.25■□□□□ 0.19
CPNE1Q99829 AC023141.13-201ENST00000604991 943 ntBASIC16.25■□□□□ 0.19
CPNE1Q99829 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE1Q99829 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 AC011477.6-201ENST00000604980 1927 ntBASIC16.25■□□□□ 0.19
CPNE1Q99829 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE1Q99829 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CPNE1Q99829 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.25■□□□□ 0.19
CPNE1Q99829 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CPNE1Q99829 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 AC073439.1-201ENST00000624121 1774 ntBASIC16.24■□□□□ 0.19
CPNE1Q99829 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CPNE1Q99829 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.24■□□□□ 0.19
CPNE1Q99829 AC140658.5-201ENST00000438532 169 ntBASIC16.24■□□□□ 0.19
CPNE1Q99829 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 IGHV3-22-201ENST00000520721 359 ntBASIC16.24■□□□□ 0.19
CPNE1Q99829 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.24■□□□□ 0.19
CPNE1Q99829 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CPNE1Q99829 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.24■□□□□ 0.19
CPNE1Q99829 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.24■□□□□ 0.19
CPNE1Q99829 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.24■□□□□ 0.19
CPNE1Q99829 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.24■□□□□ 0.19
CPNE1Q99829 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE1Q99829 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE1Q99829 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CPNE1Q99829 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE1Q99829 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms