Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NR1H4Q96RI1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 MMP23A-201ENST00000234610 1017 ntBASIC15.36■□□□□ 0.05
NR1H4Q96RI1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.36■□□□□ 0.05
NR1H4Q96RI1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 OR2I1P-209ENST00000641730 5365 ntBASIC15.36■□□□□ 0.05
NR1H4Q96RI1 LINC01144-201ENST00000626198 1710 ntBASIC15.36■□□□□ 0.05
NR1H4Q96RI1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 REXO1L1P-202ENST00000608646 1974 ntBASIC15.36■□□□□ 0.05
NR1H4Q96RI1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 AC148477.4-201ENST00000613430 1793 ntBASIC15.36■□□□□ 0.05
NR1H4Q96RI1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NR1H4Q96RI1 AL031731.1-201ENST00000642131 2094 ntBASIC15.36■□□□□ 0.05
NR1H4Q96RI1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 AC010947.1-201ENST00000623454 693 ntBASIC15.35■□□□□ 0.05
NR1H4Q96RI1 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 AC117489.1-201ENST00000625169 3217 ntBASIC15.35■□□□□ 0.05
NR1H4Q96RI1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 AJ011931.1-201ENST00000618749 2492 ntBASIC15.35■□□□□ 0.05
NR1H4Q96RI1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.35■□□□□ 0.05
NR1H4Q96RI1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms