Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AC093004.1-201ENST00000508850 424 ntBASIC18.96■□□□□ 0.63
TRIM47Q96LD4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 MIR4492-201ENST00000581627 80 ntBASIC18.96■□□□□ 0.63
TRIM47Q96LD4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AC084346.2-201ENST00000607097 949 ntBASIC18.96■□□□□ 0.63
TRIM47Q96LD4 SPTSSB-204ENST00000617024 1292 ntBASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AC007431.3-201ENST00000623221 587 ntBASIC18.96■□□□□ 0.63
TRIM47Q96LD4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRIM47Q96LD4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 RN7SL837P-201ENST00000463010 287 ntBASIC18.95■□□□□ 0.62
TRIM47Q96LD4 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 SPDYE18-201ENST00000510091 1050 ntBASIC18.95■□□□□ 0.62
TRIM47Q96LD4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 AL033527.4-201ENST00000641026 673 ntBASIC18.95■□□□□ 0.62
TRIM47Q96LD4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.95■□□□□ 0.62
TRIM47Q96LD4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRIM47Q96LD4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.94■□□□□ 0.62
TRIM47Q96LD4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms