Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 AL442647.2-201ENST00000429864 857 ntBASIC17.49■□□□□ 0.39
LRCH3Q96II8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 RHOXF1P1-202ENST00000635473 501 ntBASIC17.49■□□□□ 0.39
LRCH3Q96II8 AC008687.7-202ENST00000637404 953 ntBASIC17.49■□□□□ 0.39
LRCH3Q96II8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.49■□□□□ 0.39
LRCH3Q96II8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRCH3Q96II8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC016694.1-201ENST00000434179 700 ntBASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC008267.1-201ENST00000474858 1069 ntBASIC17.48■□□□□ 0.39
LRCH3Q96II8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 AL359711.2-201ENST00000563105 872 ntBASIC17.48■□□□□ 0.39
LRCH3Q96II8 MIR3619-201ENST00000579667 83 ntBASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC020914.3-201ENST00000594712 304 ntBASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC097724.1-201ENST00000609581 426 ntBASIC17.48■□□□□ 0.39
LRCH3Q96II8 AC074044.1-201ENST00000609673 707 ntBASIC17.48■□□□□ 0.39
LRCH3Q96II8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRCH3Q96II8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LRCH3Q96II8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRCH3Q96II8 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 AC091804.1-201ENST00000486888 567 ntBASIC17.47■□□□□ 0.39
LRCH3Q96II8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 FTLP10-202ENST00000505798 471 ntBASIC17.47■□□□□ 0.39
LRCH3Q96II8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 MTND2P7-201ENST00000521337 640 ntBASIC17.47■□□□□ 0.39
LRCH3Q96II8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.47■□□□□ 0.39
LRCH3Q96II8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms