Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 RARRES2P8-201ENST00000566335 367 ntBASIC17.2■□□□□ 0.34
TRIM11Q96F44 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRIM11Q96F44 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.2■□□□□ 0.34
TRIM11Q96F44 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.2■□□□□ 0.34
TRIM11Q96F44 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CICP6-201ENST00000457191 2729 ntBASIC17.19■□□□□ 0.34
TRIM11Q96F44 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 KRT18P3-201ENST00000451602 1288 ntBASIC17.19■□□□□ 0.34
TRIM11Q96F44 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 AC106730.1-201ENST00000566722 1090 ntBASIC17.19■□□□□ 0.34
TRIM11Q96F44 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 AL513190.1-201ENST00000621254 727 ntBASIC17.19■□□□□ 0.34
TRIM11Q96F44 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
TRIM11Q96F44 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRIM11Q96F44 AP001282.1-201ENST00000531301 1499 ntBASIC17.18■□□□□ 0.34
TRIM11Q96F44 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 AC011477.6-201ENST00000604980 1927 ntBASIC17.18■□□□□ 0.34
TRIM11Q96F44 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 AC073389.1-201ENST00000595595 795 ntBASIC17.18■□□□□ 0.34
TRIM11Q96F44 AC140113.2-201ENST00000604370 208 ntBASIC17.18■□□□□ 0.34
TRIM11Q96F44 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 AC120114.3-201ENST00000611923 658 ntBASIC17.18■□□□□ 0.34
TRIM11Q96F44 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.18■□□□□ 0.34
TRIM11Q96F44 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 AKAP8P1-201ENST00000434743 1349 ntBASIC17.18■□□□□ 0.34
TRIM11Q96F44 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRIM11Q96F44 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms