Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AC004832.2-201ENST00000426397 482 ntBASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 ADH5P3-201ENST00000433842 1137 ntBASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AC105233.2-201ENST00000523697 349 ntBASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AF228730.5-201ENST00000530288 346 ntBASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 FOXO1B-201ENST00000504678 1527 ntBASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RHBDF1Q96CC6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 FAM86C2P-203ENST00000528684 1004 ntBASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 AL671883.3-201ENST00000603274 991 ntBASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 AC008267.7-201ENST00000624570 1194 ntBASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RHBDF1Q96CC6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 GPX1P2-201ENST00000429271 606 ntBASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 AC098859.1-201ENST00000502915 1238 ntBASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RHBDF1Q96CC6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms