Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 LAGE3P1-201ENST00000425356 484 ntBASIC15.68■□□□□ 0.1
VPS33AQ96AX1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 AC107918.4-202ENST00000641623 219 ntBASIC15.68■□□□□ 0.1
VPS33AQ96AX1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS33AQ96AX1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 AC016027.1-202ENST00000607927 1699 ntBASIC15.67■□□□□ 0.1
VPS33AQ96AX1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 AKR1C7P-201ENST00000305623 895 ntBASIC15.67■□□□□ 0.1
VPS33AQ96AX1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 TSPY19P-201ENST00000418461 509 ntBASIC15.67■□□□□ 0.1
VPS33AQ96AX1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 DUSP5P1-201ENST00000441325 1139 ntBASIC15.67■□□□□ 0.1
VPS33AQ96AX1 TSPY18P-201ENST00000441642 509 ntBASIC15.67■□□□□ 0.1
VPS33AQ96AX1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 GGTLC5P-201ENST00000617623 998 ntBASIC15.67■□□□□ 0.1
VPS33AQ96AX1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VPS33AQ96AX1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 AC073621.1-201ENST00000392730 636 ntBASIC15.66■□□□□ 0.1
VPS33AQ96AX1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS33AQ96AX1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms