Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AC005622.1-201ENST00000636801 1703 ntBASIC18.26■□□□□ 0.51
USP6NLQ92738 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 KRT8P22-201ENST00000562317 1415 ntBASIC18.26■□□□□ 0.51
USP6NLQ92738 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6NLQ92738 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6NLQ92738 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.26■□□□□ 0.51
USP6NLQ92738 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6NLQ92738 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6NLQ92738 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.26■□□□□ 0.51
USP6NLQ92738 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6NLQ92738 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
USP6NLQ92738 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6NLQ92738 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6NLQ92738 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.26■□□□□ 0.51
USP6NLQ92738 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.26■□□□□ 0.51
USP6NLQ92738 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6NLQ92738 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.26■□□□□ 0.51
USP6NLQ92738 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6NLQ92738 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
USP6NLQ92738 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.26■□□□□ 0.51
USP6NLQ92738 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.25■□□□□ 0.51
USP6NLQ92738 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.25■□□□□ 0.51
USP6NLQ92738 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
USP6NLQ92738 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 AL162726.2-201ENST00000438986 1017 ntBASIC18.25■□□□□ 0.51
USP6NLQ92738 KLF2P4-201ENST00000451959 1225 ntBASIC18.25■□□□□ 0.51
USP6NLQ92738 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.25■□□□□ 0.51
USP6NLQ92738 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.25■□□□□ 0.51
USP6NLQ92738 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.25■□□□□ 0.51
USP6NLQ92738 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.25■□□□□ 0.51
USP6NLQ92738 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USP6NLQ92738 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 GPR182-203ENST00000622922 591 ntBASIC18.25■□□□□ 0.51
USP6NLQ92738 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
USP6NLQ92738 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.25■□□□□ 0.51
USP6NLQ92738 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.25■□□□□ 0.51
USP6NLQ92738 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
USP6NLQ92738 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
USP6NLQ92738 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 TUBB1P2-201ENST00000422712 1306 ntBASIC18.24■□□□□ 0.51
USP6NLQ92738 TUBB1P1-201ENST00000503144 1300 ntBASIC18.24■□□□□ 0.51
USP6NLQ92738 PCGF3-213ENST00000620529 1899 ntBASIC18.24■□□□□ 0.51
USP6NLQ92738 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.24■□□□□ 0.51
USP6NLQ92738 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.24■□□□□ 0.51
USP6NLQ92738 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
USP6NLQ92738 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
USP6NLQ92738 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.24■□□□□ 0.51
USP6NLQ92738 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.24■□□□□ 0.51
USP6NLQ92738 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18.24■□□□□ 0.51
USP6NLQ92738 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.24■□□□□ 0.51
USP6NLQ92738 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.24■□□□□ 0.51
USP6NLQ92738 RNA5SP412-201ENST00000516234 123 ntBASIC18.24■□□□□ 0.51
USP6NLQ92738 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
USP6NLQ92738 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.24■□□□□ 0.51
USP6NLQ92738 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.24■□□□□ 0.51
USP6NLQ92738 BRI3BPP1-201ENST00000594224 787 ntBASIC18.24■□□□□ 0.51
USP6NLQ92738 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.24■□□□□ 0.51
USP6NLQ92738 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.24■□□□□ 0.51
USP6NLQ92738 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.24■□□□□ 0.51
USP6NLQ92738 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP6NLQ92738 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.24■□□□□ 0.51
USP6NLQ92738 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms