Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC3Q92529 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SHC3Q92529 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.29■□□□□ 0.36
SHC3Q92529 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHC3Q92529 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.29■□□□□ 0.36
SHC3Q92529 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC3Q92529 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.29■□□□□ 0.36
SHC3Q92529 RNA5SP410-201ENST00000516285 106 ntBASIC17.29■□□□□ 0.36
SHC3Q92529 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC3Q92529 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.29■□□□□ 0.36
SHC3Q92529 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.29■□□□□ 0.36
SHC3Q92529 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHC3Q92529 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC3Q92529 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 AL162727.3-201ENST00000635661 2787 ntBASIC17.29■□□□□ 0.36
SHC3Q92529 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SHC3Q92529 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
SHC3Q92529 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC3Q92529 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SHC3Q92529 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC3Q92529 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
SHC3Q92529 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC3Q92529 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC3Q92529 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 RPSAP43-201ENST00000402237 625 ntBASIC17.28■□□□□ 0.36
SHC3Q92529 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.28■□□□□ 0.36
SHC3Q92529 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 BX842568.4-201ENST00000421222 227 ntBASIC17.28■□□□□ 0.36
SHC3Q92529 AC112482.1-201ENST00000492080 688 ntBASIC17.28■□□□□ 0.36
SHC3Q92529 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.28■□□□□ 0.36
SHC3Q92529 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC3Q92529 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC3Q92529 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 AL691432.1-201ENST00000596308 1422 ntBASIC17.28■□□□□ 0.36
SHC3Q92529 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC3Q92529 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC3Q92529 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC3Q92529 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SHC3Q92529 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
SHC3Q92529 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 UXT-AS1-201ENST00000590504 1525 ntBASIC17.27■□□□□ 0.36
SHC3Q92529 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SHC3Q92529 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC3Q92529 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC3Q92529 RPS8P6-201ENST00000426177 609 ntBASIC17.27■□□□□ 0.36
SHC3Q92529 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC3Q92529 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC3Q92529 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC3Q92529 AC093520.2-201ENST00000561830 333 ntBASIC17.27■□□□□ 0.36
SHC3Q92529 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.27■□□□□ 0.36
SHC3Q92529 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 AC010327.4-202ENST00000591484 748 ntBASIC17.27■□□□□ 0.36
SHC3Q92529 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC3Q92529 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC3Q92529 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC3Q92529 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC3Q92529 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHC3Q92529 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC3Q92529 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.27■□□□□ 0.35
SHC3Q92529 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHC3Q92529 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHC3Q92529 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms