Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SPDYE9P-201ENST00000570642 692 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SPDYE10P-202ENST00000612005 668 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SPDYE8P-202ENST00000612377 668 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PCDH19Q8TAB3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 MIR346-201ENST00000362234 95 ntBASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 ACTG1P14-201ENST00000446382 1122 ntBASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDH19Q8TAB3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AC105917.1-201ENST00000506637 2539 ntBASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AC254562.1-201ENST00000417586 456 ntBASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AP000842.3-202ENST00000569238 1080 ntBASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 AC061975.2-201ENST00000581722 295 ntBASIC16.75■□□□□ 0.27
PCDH19Q8TAB3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms