Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RTL3Q8N8U3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.63■□□□□ 0.25
RTL3Q8N8U3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 METTL21AP1-201ENST00000438852 635 ntBASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC004449.1-201ENST00000564240 433 ntBASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC007967.4-201ENST00000614700 386 ntBASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC093028.1-201ENST00000622998 982 ntBASIC16.63■□□□□ 0.25
RTL3Q8N8U3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 AC008677.1-201ENST00000519230 1561 ntBASIC16.63■□□□□ 0.25
RTL3Q8N8U3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTL3Q8N8U3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 AC092183.1-201ENST00000469884 875 ntBASIC16.62■□□□□ 0.25
RTL3Q8N8U3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 AC025678.2-201ENST00000562061 970 ntBASIC16.62■□□□□ 0.25
RTL3Q8N8U3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.62■□□□□ 0.25
RTL3Q8N8U3 MIR4453-201ENST00000584019 89 ntBASIC16.62■□□□□ 0.25
RTL3Q8N8U3 AC026979.3-201ENST00000607315 403 ntBASIC16.62■□□□□ 0.25
RTL3Q8N8U3 AC003101.2-201ENST00000612557 442 ntBASIC16.62■□□□□ 0.25
RTL3Q8N8U3 Z92544.3-201ENST00000624747 417 ntBASIC16.62■□□□□ 0.25
RTL3Q8N8U3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms