Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 AC015936.2-201ENST00000593177 259 ntBASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 AL512343.1-201ENST00000605837 169 ntBASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 AC074044.1-201ENST00000609673 707 ntBASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 TNRC18P3-201ENST00000441896 2691 ntBASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 FER1L4-210ENST00000615531 5998 ntBASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SYNPOQ8N3V7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 AC234783.1-201ENST00000441761 496 ntBASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 AL391256.1-201ENST00000443260 1855 ntBASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SYNPOQ8N3V7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 GPAA1P2-202ENST00000606848 1787 ntBASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AL512652.2-201ENST00000625156 1716 ntBASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AC104596.2-201ENST00000512793 793 ntBASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SYNPOQ8N3V7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms