Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
XRN1Q8IZH2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 BTBD6P1-201ENST00000412176 1267 ntBASIC22.04■■□□□ 1.12
XRN1Q8IZH2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 ADM-202ENST00000524948 584 ntTSL 2 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 AC023310.1-201ENST00000554836 735 ntBASIC22.04■■□□□ 1.12
XRN1Q8IZH2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
XRN1Q8IZH2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 TSACC-208ENST00000481479 741 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 FOS-206ENST00000555347 1280 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 AHCYP2-201ENST00000430630 1300 ntBASIC22.03■■□□□ 1.12
XRN1Q8IZH2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 ECM1P1-201ENST00000604092 1279 ntBASIC22.03■■□□□ 1.12
XRN1Q8IZH2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC22.03■■□□□ 1.12
XRN1Q8IZH2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 AC105020.1-201ENST00000435356 2205 ntBASIC22.02■■□□□ 1.12
XRN1Q8IZH2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 AC139713.2-201ENST00000641328 2723 ntBASIC22.02■■□□□ 1.12
XRN1Q8IZH2 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 AKR7A2P1-201ENST00000460134 915 ntBASIC22.02■■□□□ 1.12
XRN1Q8IZH2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC22.02■■□□□ 1.12
XRN1Q8IZH2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC22.02■■□□□ 1.11
XRN1Q8IZH2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 HNRNPA1P32-201ENST00000396326 963 ntBASIC22.01■■□□□ 1.11
XRN1Q8IZH2 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 EIF4HP1-201ENST00000453115 687 ntBASIC22.01■■□□□ 1.11
XRN1Q8IZH2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 AC020914.3-201ENST00000594712 304 ntBASIC22.01■■□□□ 1.11
XRN1Q8IZH2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 AC145423.3-201ENST00000615987 467 ntBASIC22.01■■□□□ 1.11
XRN1Q8IZH2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
XRN1Q8IZH2 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC22■■□□□ 1.11
XRN1Q8IZH2 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
XRN1Q8IZH2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC22■■□□□ 1.11
XRN1Q8IZH2 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC22■■□□□ 1.11
XRN1Q8IZH2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms