Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
LYSMD2Q8IV50 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 AC090616.6-203ENST00000579186 1945 ntBASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 AC148477.4-201ENST00000613430 1793 ntBASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 KRT8P49-201ENST00000604166 1432 ntBASIC14.32□□□□□ -0.12
LYSMD2Q8IV50 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 COX11P1-201ENST00000489116 835 ntBASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 RNF126P1-202ENST00000569893 925 ntBASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 AL138831.2-201ENST00000606564 490 ntBASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 AC011558.1-201ENST00000623459 338 ntBASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 AL365209.1-201ENST00000624418 6473 ntBASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 AL122018.1-201ENST00000446607 2310 ntBASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 C18orf15-201ENST00000623680 2534 ntBASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD2Q8IV50 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD2Q8IV50 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms