Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPAS4Q8IUM7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 ACTG1P3-201ENST00000431775 1114 ntBASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 FAM86LP-201ENST00000478302 853 ntBASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 MIR5189-201ENST00000577370 114 ntBASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 BRI3BPP1-201ENST00000594224 787 ntBASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 UBALD1-205ENST00000590891 2641 ntBASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPAS4Q8IUM7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 BNIP3P42-201ENST00000454982 569 ntBASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 BNIP3P29-201ENST00000598302 571 ntBASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 AC011447.5-201ENST00000616168 564 ntBASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPAS4Q8IUM7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 REXO1L6P-201ENST00000603433 1515 ntBASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms