Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 FLJ16779-201ENST00000612722 7638 ntBASIC14.54□□□□□ -0.08
LRRC28Q86X40 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 KRT18P27-201ENST00000427733 1299 ntBASIC14.54□□□□□ -0.08
LRRC28Q86X40 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 RPL13AP23-201ENST00000480739 586 ntBASIC14.54□□□□□ -0.08
LRRC28Q86X40 AC092910.1-201ENST00000482027 1129 ntBASIC14.54□□□□□ -0.08
LRRC28Q86X40 IGHV3-22-201ENST00000520721 359 ntBASIC14.54□□□□□ -0.08
LRRC28Q86X40 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 PGM5P2-202ENST00000637225 1043 ntBASIC14.54□□□□□ -0.08
LRRC28Q86X40 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRC28Q86X40 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
LRRC28Q86X40 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AP000347.1-202ENST00000435868 847 ntBASIC14.53□□□□□ -0.08
LRRC28Q86X40 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AL356488.2-201ENST00000602755 427 ntBASIC14.53□□□□□ -0.08
LRRC28Q86X40 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.53□□□□□ -0.08
LRRC28Q86X40 MIR1199-201ENST00000621445 119 ntBASIC14.53□□□□□ -0.08
LRRC28Q86X40 AF228730.7-201ENST00000641842 219 ntBASIC14.53□□□□□ -0.08
LRRC28Q86X40 AP002414.2-201ENST00000591780 3365 ntBASIC14.53□□□□□ -0.08
LRRC28Q86X40 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.53□□□□□ -0.08
LRRC28Q86X40 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LRRC28Q86X40 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.52□□□□□ -0.08
LRRC28Q86X40 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
LRRC28Q86X40 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LRRC28Q86X40 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
LRRC28Q86X40 AL009178.2-201ENST00000597278 2719 ntBASIC14.52□□□□□ -0.08
LRRC28Q86X40 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms