Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 FGFR3P6-201ENST00000457012 610 ntBASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AL049597.2-201ENST00000565575 961 ntBASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AL355877.3-201ENST00000622820 899 ntBASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 AP003680.1-201ENST00000598970 3660 ntBASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
LRRTM1Q86UE6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 FAM45BP-202ENST00000592932 1624 ntBASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 AP000550.4-202ENST00000639755 178 ntBASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRRTM1Q86UE6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRRTM1Q86UE6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRRTM1Q86UE6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
LRRTM1Q86UE6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 RPS15P9-201ENST00000494093 319 ntBASIC14.14□□□□□ -0.15
LRRTM1Q86UE6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms