Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 DNAJB3-201ENST00000446806 729 ntBASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 AC107918.4-202ENST00000641623 219 ntBASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 AC007191.1-201ENST00000623179 2995 ntBASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FOXR1Q6PIV2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 MIR1199-201ENST00000621445 119 ntBASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXR1Q6PIV2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXR1Q6PIV2 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 PMS2P2-201ENST00000425039 1128 ntBASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXR1Q6PIV2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms