Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 AC027307.3-201ENST00000594262 1100 ntBASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC27A1Q6PCB7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 LTB4R2-202ENST00000528054 3092 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 HAUS4P1-201ENST00000406739 1145 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 DOC2GP-202ENST00000514950 1163 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AC025048.3-201ENST00000590609 569 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AL132655.2-201ENST00000596276 594 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AL662799.1-202ENST00000614205 422 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AC005702.4-201ENST00000618393 416 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AC004461.2-201ENST00000629517 803 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 AC007541.1-201ENST00000570282 1469 ntBASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC27A1Q6PCB7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 PRORSD1P-202ENST00000563365 2154 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 AC020916.1-201ENST00000587762 1774 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 AP001282.1-201ENST00000531301 1499 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 GNAQP1-201ENST00000444815 1067 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 SPDYE18-201ENST00000510091 1050 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 AC074044.1-201ENST00000609673 707 ntBASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC27A1Q6PCB7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms