Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.21■□□□□ 0.51
CCDC62Q6P9F0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC62Q6P9F0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC62Q6P9F0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC62Q6P9F0 AC084018.2-201ENST00000613093 2607 ntBASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 AL109936.8-201ENST00000641772 604 ntBASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC62Q6P9F0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 AC087499.6-201ENST00000411576 835 ntBASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 AC138969.3-201ENST00000546612 1459 ntBASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 AC138932.2-201ENST00000548268 1459 ntBASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 AC126755.4-201ENST00000549796 1459 ntBASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC62Q6P9F0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 SLC7A15P-201ENST00000424028 1363 ntBASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 CYP4F24P-201ENST00000586049 1580 ntBASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 AC098614.1-201ENST00000368528 745 ntBASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 AL589987.1-201ENST00000453380 819 ntBASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC62Q6P9F0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms