Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CDC42BPAQ5VT25 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 HARS-202ENST00000415192 1401 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 LARP4-220ENST00000615080 856 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 AC068587.10-201ENST00000641210 219 ntBASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
CDC42BPAQ5VT25 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 GOLGA2P4-201ENST00000441462 777 ntBASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 AC009486.1-201ENST00000569860 813 ntBASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 PRKN-211ENST00000615065 261 ntTSL 5 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CDC42BPAQ5VT25 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 GPAA1P2-201ENST00000417923 928 ntBASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
CDC42BPAQ5VT25 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 OS9-205ENST00000413095 1660 ntTSL 2 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 ACTBP8-201ENST00000403258 1108 ntBASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 AC008687.7-202ENST00000637404 953 ntBASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms