Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RC3H1Q5TC82 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RC3H1Q5TC82 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RC3H1Q5TC82 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.15■□□□□ 0.82
RC3H1Q5TC82 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RC3H1Q5TC82 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
RC3H1Q5TC82 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RC3H1Q5TC82 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.14■□□□□ 0.82
RC3H1Q5TC82 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RC3H1Q5TC82 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 AP001282.1-201ENST00000531301 1499 ntBASIC20.14■□□□□ 0.81
RC3H1Q5TC82 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.14■□□□□ 0.81
RC3H1Q5TC82 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AC105020.1-201ENST00000435356 2205 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AC006001.1-201ENST00000325130 474 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 C2orf27AP3-201ENST00000434123 579 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AC023310.1-201ENST00000554836 735 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AC097359.3-201ENST00000603982 1210 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AC093813.1-201ENST00000605066 256 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AL354718.3-201ENST00000616414 581 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 CR382287.1-201ENST00000623954 586 ntBASIC20.13■□□□□ 0.81
RC3H1Q5TC82 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.13■□□□□ 0.81
RC3H1Q5TC82 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 DRD5P1-201ENST00000456605 1438 ntBASIC20.12■□□□□ 0.81
RC3H1Q5TC82 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 AC025279.2-201ENST00000569730 653 ntBASIC20.12■□□□□ 0.81
RC3H1Q5TC82 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.12■□□□□ 0.81
RC3H1Q5TC82 AL450472.2-201ENST00000603663 1156 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms