Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 AC063952.2-201ENST00000498792 1227 ntBASIC11.55□□□□□ -0.56
RPL39P62891 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 Z69720.1-201ENST00000601483 472 ntBASIC11.55□□□□□ -0.56
RPL39P62891 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.55□□□□□ -0.56
RPL39P62891 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 AC073592.4-201ENST00000623827 446 ntBASIC11.55□□□□□ -0.56
RPL39P62891 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.55□□□□□ -0.56
RPL39P62891 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.55□□□□□ -0.56
RPL39P62891 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 AC020658.6-201ENST00000623564 1870 ntBASIC11.55□□□□□ -0.56
RPL39P62891 AC138035.3-201ENST00000622706 2791 ntBASIC11.55□□□□□ -0.56
RPL39P62891 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 NSUN5P1-202ENST00000421140 1535 ntBASIC11.55□□□□□ -0.56
RPL39P62891 NSUN5P2-203ENST00000457352 1529 ntBASIC11.55□□□□□ -0.56
RPL39P62891 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RPL39P62891 OR2I1P-209ENST00000641730 5365 ntBASIC11.55□□□□□ -0.56
RPL39P62891 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RPL39P62891 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 FAM45BP-202ENST00000592932 1624 ntBASIC11.54□□□□□ -0.56
RPL39P62891 AC092919.2-201ENST00000623631 1645 ntBASIC11.54□□□□□ -0.56
RPL39P62891 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.54□□□□□ -0.56
RPL39P62891 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.54□□□□□ -0.56
RPL39P62891 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC11.54□□□□□ -0.56
RPL39P62891 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.54□□□□□ -0.56
RPL39P62891 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.54□□□□□ -0.56
RPL39P62891 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.54□□□□□ -0.56
RPL39P62891 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 AC022616.7-201ENST00000525383 220 ntBASIC11.54□□□□□ -0.56
RPL39P62891 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.54□□□□□ -0.56
RPL39P62891 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC11.54□□□□□ -0.56
RPL39P62891 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.54□□□□□ -0.56
RPL39P62891 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
RPL39P62891 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.54□□□□□ -0.56
RPL39P62891 CYP2A7P1-201ENST00000595391 815 ntBASIC11.54□□□□□ -0.56
RPL39P62891 AL121672.3-201ENST00000608644 468 ntBASIC11.54□□□□□ -0.56
RPL39P62891 AC012306.2-201ENST00000609350 630 ntBASIC11.54□□□□□ -0.56
RPL39P62891 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
RPL39P62891 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
RPL39P62891 AC097493.4-201ENST00000641197 219 ntBASIC11.54□□□□□ -0.56
RPL39P62891 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 KRT18P1-202ENST00000452408 1331 ntBASIC11.54□□□□□ -0.56
RPL39P62891 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.54□□□□□ -0.56
RPL39P62891 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
RPL39P62891 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RPL39P62891 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
RPL39P62891 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms