Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
RAB5BP61020 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RAB5BP61020 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 AC008677.1-201ENST00000519230 1561 ntBASIC12.74□□□□□ -0.37
RAB5BP61020 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB5BP61020 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB5BP61020 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RAB5BP61020 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RAB5BP61020 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB5BP61020 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
RAB5BP61020 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.74□□□□□ -0.37
RAB5BP61020 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RAB5BP61020 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB5BP61020 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 AC034268.1-201ENST00000441047 882 ntBASIC12.73□□□□□ -0.37
RAB5BP61020 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 AC011767.1-201ENST00000617410 1153 ntBASIC12.73□□□□□ -0.37
RAB5BP61020 AC131212.4-201ENST00000623606 975 ntBASIC12.73□□□□□ -0.37
RAB5BP61020 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 WWOX-218ENST00000627394 894 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB5BP61020 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
RAB5BP61020 AC131902.2-201ENST00000566892 2172 ntBASIC12.73□□□□□ -0.37
RAB5BP61020 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB5BP61020 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB5BP61020 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB5BP61020 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms