Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB38P57729 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB38P57729 AL139010.1-201ENST00000454878 894 ntBASIC15.25■□□□□ 0.03
RAB38P57729 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 AC067863.1-201ENST00000494933 530 ntBASIC15.25■□□□□ 0.03
RAB38P57729 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB38P57729 AC105021.1-202ENST00000570572 669 ntBASIC15.25■□□□□ 0.03
RAB38P57729 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB38P57729 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.25■□□□□ 0.03
RAB38P57729 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.25■□□□□ 0.03
RAB38P57729 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RAB38P57729 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.25■□□□□ 0.03
RAB38P57729 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
RAB38P57729 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAB38P57729 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB38P57729 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 AL035456.1-201ENST00000456064 1369 ntBASIC15.24■□□□□ 0.03
RAB38P57729 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB38P57729 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 TUBB3P1-201ENST00000405796 1332 ntBASIC15.24■□□□□ 0.03
RAB38P57729 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB38P57729 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB38P57729 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB38P57729 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.24■□□□□ 0.03
RAB38P57729 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB38P57729 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.24■□□□□ 0.03
RAB38P57729 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAB38P57729 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAB38P57729 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 AL513523.2-202ENST00000427283 2040 ntBASIC15.24■□□□□ 0.03
RAB38P57729 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.24■□□□□ 0.03
RAB38P57729 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAB38P57729 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB38P57729 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAB38P57729 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 AP001282.1-201ENST00000531301 1499 ntBASIC15.23■□□□□ 0.03
RAB38P57729 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.23■□□□□ 0.03
RAB38P57729 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB38P57729 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAB38P57729 FAM86GP-201ENST00000448322 971 ntBASIC15.23■□□□□ 0.03
RAB38P57729 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB38P57729 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.23■□□□□ 0.03
RAB38P57729 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB38P57729 BANF1P1-201ENST00000553684 263 ntBASIC15.23■□□□□ 0.03
RAB38P57729 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.23■□□□□ 0.03
RAB38P57729 AC243562.2-201ENST00000561247 970 ntBASIC15.23■□□□□ 0.03
RAB38P57729 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.23■□□□□ 0.03
RAB38P57729 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms