Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.3■□□□□ 0.04
SMSP52788 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 AC004461.1-201ENST00000412461 403 ntBASIC15.3■□□□□ 0.04
SMSP52788 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.3■□□□□ 0.04
SMSP52788 AC244107.1-201ENST00000442033 332 ntBASIC15.3■□□□□ 0.04
SMSP52788 COX20P2-201ENST00000452636 358 ntBASIC15.3■□□□□ 0.04
SMSP52788 AC023141.5-201ENST00000458585 616 ntBASIC15.3■□□□□ 0.04
SMSP52788 HLA-J-203ENST00000494367 1087 ntBASIC15.3■□□□□ 0.04
SMSP52788 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.3■□□□□ 0.04
SMSP52788 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
SMSP52788 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.3■□□□□ 0.04
SMSP52788 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.3■□□□□ 0.04
SMSP52788 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.3■□□□□ 0.04
SMSP52788 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SMSP52788 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.3■□□□□ 0.04
SMSP52788 AC005052.1-201ENST00000625181 2492 ntBASIC15.3■□□□□ 0.04
SMSP52788 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.3■□□□□ 0.04
SMSP52788 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SMSP52788 AL136379.1-201ENST00000623471 2642 ntBASIC15.3■□□□□ 0.04
SMSP52788 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SMSP52788 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 BCRP1-201ENST00000444246 691 ntBASIC15.29■□□□□ 0.04
SMSP52788 AL513480.1-201ENST00000451731 511 ntBASIC15.29■□□□□ 0.04
SMSP52788 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 AC067863.1-201ENST00000494933 530 ntBASIC15.29■□□□□ 0.04
SMSP52788 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SMSP52788 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.29■□□□□ 0.04
SMSP52788 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SMSP52788 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
SMSP52788 FLJ16779-201ENST00000612722 7638 ntBASIC15.29■□□□□ 0.04
SMSP52788 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SMSP52788 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.28■□□□□ 0.04
SMSP52788 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 AC002056.1-201ENST00000395613 760 ntBASIC15.28■□□□□ 0.04
SMSP52788 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.28■□□□□ 0.04
SMSP52788 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.28■□□□□ 0.04
SMSP52788 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.28■□□□□ 0.04
SMSP52788 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.28■□□□□ 0.04
SMSP52788 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.28■□□□□ 0.04
SMSP52788 RNA5SP421-201ENST00000516864 134 ntBASIC15.28■□□□□ 0.04
SMSP52788 FAM86C2P-203ENST00000528684 1004 ntBASIC15.28■□□□□ 0.04
SMSP52788 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.28■□□□□ 0.04
SMSP52788 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.28■□□□□ 0.04
SMSP52788 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SMSP52788 LINC00628-201ENST00000628516 1289 ntBASIC15.28■□□□□ 0.04
SMSP52788 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SMSP52788 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms