Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.15■□□□□ 0.34
TUBP50607 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TUBP50607 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TUBP50607 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TUBP50607 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TUBP50607 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBP50607 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TUBP50607 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TUBP50607 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBP50607 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBP50607 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.14■□□□□ 0.33
TUBP50607 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBP50607 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBP50607 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.14■□□□□ 0.33
TUBP50607 SPCS2P1-201ENST00000561636 679 ntBASIC17.14■□□□□ 0.33
TUBP50607 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TUBP50607 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.14■□□□□ 0.33
TUBP50607 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBP50607 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.14■□□□□ 0.33
TUBP50607 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TUBP50607 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TUBP50607 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TUBP50607 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TUBP50607 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBP50607 AC055876.3-201ENST00000431496 288 ntBASIC17.13■□□□□ 0.33
TUBP50607 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.13■□□□□ 0.33
TUBP50607 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.13■□□□□ 0.33
TUBP50607 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 AL390955.2-201ENST00000603032 514 ntBASIC17.13■□□□□ 0.33
TUBP50607 AC138649.4-201ENST00000612222 287 ntBASIC17.13■□□□□ 0.33
TUBP50607 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
TUBP50607 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBP50607 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TUBP50607 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TUBP50607 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.12■□□□□ 0.33
TUBP50607 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TUBP50607 MIR943-201ENST00000401286 94 ntBASIC17.12■□□□□ 0.33
TUBP50607 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBP50607 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.12■□□□□ 0.33
TUBP50607 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBP50607 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBP50607 RNA5SP421-201ENST00000516864 134 ntBASIC17.12■□□□□ 0.33
TUBP50607 AC069120.2-201ENST00000524091 540 ntBASIC17.12■□□□□ 0.33
TUBP50607 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms