Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC002472.2-201ENST00000442739 958 ntBASIC14.91□□□□□ -0.02
RFC3P40938 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.91□□□□□ -0.02
RFC3P40938 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.91□□□□□ -0.02
RFC3P40938 AC098859.1-201ENST00000502915 1238 ntBASIC14.91□□□□□ -0.02
RFC3P40938 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC3P40938 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC3P40938 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
RFC3P40938 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.91□□□□□ -0.02
RFC3P40938 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.91□□□□□ -0.02
RFC3P40938 RN7SL204P-201ENST00000582831 262 ntBASIC14.91□□□□□ -0.02
RFC3P40938 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC3P40938 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 AC007967.4-201ENST00000614700 386 ntBASIC14.91□□□□□ -0.02
RFC3P40938 AL138828.2-201ENST00000615812 383 ntBASIC14.91□□□□□ -0.02
RFC3P40938 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RFC3P40938 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC3P40938 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 AC100757.3-201ENST00000622361 1406 ntBASIC14.91□□□□□ -0.02
RFC3P40938 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RFC3P40938 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
RFC3P40938 AC078925.2-201ENST00000624013 1973 ntBASIC14.91□□□□□ -0.02
RFC3P40938 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC3P40938 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC3P40938 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RFC3P40938 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RFC3P40938 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFC3P40938 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC3P40938 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFC3P40938 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.9□□□□□ -0.02
RFC3P40938 AC241585.1-201ENST00000433527 519 ntBASIC14.9□□□□□ -0.02
RFC3P40938 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC3P40938 COX20P2-201ENST00000452636 358 ntBASIC14.9□□□□□ -0.02
RFC3P40938 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RFC3P40938 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.9□□□□□ -0.02
RFC3P40938 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC3P40938 AL139011.1-202ENST00000642063 584 ntBASIC14.9□□□□□ -0.02
RFC3P40938 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC3P40938 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFC3P40938 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC3P40938 AC092171.3-201ENST00000610122 2651 ntBASIC14.89□□□□□ -0.03
RFC3P40938 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC3P40938 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC3P40938 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RFC3P40938 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms