Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CIITAP33076 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.22■□□□□ 0.51
CIITAP33076 FO393414.2-201ENST00000405153 598 ntBASIC18.22■□□□□ 0.51
CIITAP33076 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.22■□□□□ 0.51
CIITAP33076 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.22■□□□□ 0.51
CIITAP33076 AC009477.1-201ENST00000452936 217 ntBASIC18.22■□□□□ 0.51
CIITAP33076 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.22■□□□□ 0.51
CIITAP33076 AC093214.1-201ENST00000511688 1107 ntBASIC18.22■□□□□ 0.51
CIITAP33076 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.22■□□□□ 0.51
CIITAP33076 ZNF890P-202ENST00000530367 1156 ntBASIC18.22■□□□□ 0.51
CIITAP33076 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.22■□□□□ 0.51
CIITAP33076 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.22■□□□□ 0.51
CIITAP33076 AL096865.1-201ENST00000606796 927 ntBASIC18.22■□□□□ 0.51
CIITAP33076 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.22■□□□□ 0.51
CIITAP33076 AC099398.1-201ENST00000567919 2776 ntBASIC18.22■□□□□ 0.51
CIITAP33076 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CIITAP33076 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CIITAP33076 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CIITAP33076 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CIITAP33076 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CIITAP33076 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.21■□□□□ 0.51
CIITAP33076 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 BCRP1-201ENST00000444246 691 ntBASIC18.21■□□□□ 0.51
CIITAP33076 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.21■□□□□ 0.51
CIITAP33076 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.21■□□□□ 0.51
CIITAP33076 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.21■□□□□ 0.51
CIITAP33076 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.21■□□□□ 0.51
CIITAP33076 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.21■□□□□ 0.51
CIITAP33076 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CIITAP33076 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CIITAP33076 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.21■□□□□ 0.5
CIITAP33076 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CIITAP33076 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.2■□□□□ 0.5
CIITAP33076 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.2■□□□□ 0.5
CIITAP33076 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.2■□□□□ 0.5
CIITAP33076 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.2■□□□□ 0.5
CIITAP33076 AL512361.1-201ENST00000554200 418 ntBASIC18.2■□□□□ 0.5
CIITAP33076 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.2■□□□□ 0.5
CIITAP33076 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.2■□□□□ 0.5
CIITAP33076 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.2■□□□□ 0.5
CIITAP33076 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 AL033527.5-202ENST00000641632 1098 ntBASIC18.2■□□□□ 0.5
CIITAP33076 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CIITAP33076 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CIITAP33076 KRT8P37-201ENST00000451609 1420 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms