Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.98□□□□□ -0.01
ABCD3P28288 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.98□□□□□ -0.01
ABCD3P28288 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.98□□□□□ -0.01
ABCD3P28288 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.98□□□□□ -0.01
ABCD3P28288 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 Z92544.3-201ENST00000624747 417 ntBASIC14.98□□□□□ -0.01
ABCD3P28288 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 AC103702.1-201ENST00000548801 2630 ntBASIC14.98□□□□□ -0.01
ABCD3P28288 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.98□□□□□ -0.01
ABCD3P28288 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 AC008677.1-201ENST00000519230 1561 ntBASIC14.98□□□□□ -0.01
ABCD3P28288 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ABCD3P28288 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ABCD3P28288 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.97□□□□□ -0.01
ABCD3P28288 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.97□□□□□ -0.01
ABCD3P28288 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ABCD3P28288 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ABCD3P28288 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCD3P28288 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 AL353705.2-201ENST00000428243 662 ntBASIC14.97□□□□□ -0.01
ABCD3P28288 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 CNN2P2-201ENST00000443536 909 ntBASIC14.97□□□□□ -0.01
ABCD3P28288 CNN2P3-201ENST00000450201 906 ntBASIC14.97□□□□□ -0.01
ABCD3P28288 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.97□□□□□ -0.01
ABCD3P28288 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCD3P28288 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCD3P28288 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCD3P28288 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCD3P28288 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.97□□□□□ -0.01
ABCD3P28288 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 AL136317.3-201ENST00000618497 906 ntBASIC14.97□□□□□ -0.01
ABCD3P28288 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.97□□□□□ -0.01
ABCD3P28288 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ABCD3P28288 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.97□□□□□ -0.01
ABCD3P28288 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.97□□□□□ -0.01
ABCD3P28288 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ABCD3P28288 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 AL596087.1-201ENST00000400979 1969 ntBASIC14.96□□□□□ -0.01
ABCD3P28288 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 CYP2T1P-202ENST00000641596 2535 ntBASIC14.96□□□□□ -0.01
ABCD3P28288 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.96□□□□□ -0.01
ABCD3P28288 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ABCD3P28288 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.96□□□□□ -0.01
ABCD3P28288 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ABCD3P28288 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.96□□□□□ -0.01
ABCD3P28288 PMS2P2-201ENST00000425039 1128 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms