Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NR4A1P22736 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 FAM45BP-202ENST00000592932 1624 ntBASIC15.2■□□□□ 0.02
NR4A1P22736 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NR4A1P22736 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NR4A1P22736 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.2■□□□□ 0.02
NR4A1P22736 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.19■□□□□ 0.02
NR4A1P22736 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.19■□□□□ 0.02
NR4A1P22736 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 AC079781.3-201ENST00000449110 356 ntBASIC15.19■□□□□ 0.02
NR4A1P22736 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 AL160237.2-201ENST00000556165 472 ntBASIC15.19■□□□□ 0.02
NR4A1P22736 AC104692.2-201ENST00000603054 253 ntBASIC15.19■□□□□ 0.02
NR4A1P22736 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.19■□□□□ 0.02
NR4A1P22736 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.19■□□□□ 0.02
NR4A1P22736 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NR4A1P22736 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NR4A1P22736 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
NR4A1P22736 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
NR4A1P22736 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.18■□□□□ 0.02
NR4A1P22736 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
NR4A1P22736 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
NR4A1P22736 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NR4A1P22736 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.18■□□□□ 0.02
NR4A1P22736 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
NR4A1P22736 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.18■□□□□ 0.02
NR4A1P22736 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.18■□□□□ 0.02
NR4A1P22736 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.18■□□□□ 0.02
NR4A1P22736 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NR4A1P22736 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.18■□□□□ 0.02
NR4A1P22736 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.18■□□□□ 0.02
NR4A1P22736 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.18■□□□□ 0.02
NR4A1P22736 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.18■□□□□ 0.02
NR4A1P22736 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 PMPCAP1-201ENST00000508114 1576 ntBASIC15.18■□□□□ 0.02
NR4A1P22736 AL049757.1-201ENST00000616842 1596 ntBASIC15.18■□□□□ 0.02
NR4A1P22736 AC023157.3-201ENST00000619086 2088 ntBASIC15.18■□□□□ 0.02
NR4A1P22736 AC079781.5-202ENST00000641784 3743 ntBASIC15.18■□□□□ 0.02
NR4A1P22736 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.18■□□□□ 0.02
NR4A1P22736 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NR4A1P22736 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms