Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPN3P20807 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CAPN3P20807 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.7■□□□□ 0.1
CAPN3P20807 HCG4-201ENST00000418983 998 ntBASIC15.7■□□□□ 0.1
CAPN3P20807 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPN3P20807 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN3P20807 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.7■□□□□ 0.1
CAPN3P20807 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN3P20807 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.7■□□□□ 0.1
CAPN3P20807 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CAPN3P20807 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CAPN3P20807 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.7■□□□□ 0.1
CAPN3P20807 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.7■□□□□ 0.1
CAPN3P20807 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CAPN3P20807 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 AP002414.2-201ENST00000591780 3365 ntBASIC15.69■□□□□ 0.1
CAPN3P20807 AC092919.2-201ENST00000623631 1645 ntBASIC15.69■□□□□ 0.1
CAPN3P20807 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CAPN3P20807 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CAPN3P20807 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.69■□□□□ 0.1
CAPN3P20807 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.69■□□□□ 0.1
CAPN3P20807 HNRNPDP1-201ENST00000439535 754 ntBASIC15.69■□□□□ 0.1
CAPN3P20807 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.69■□□□□ 0.1
CAPN3P20807 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.69■□□□□ 0.1
CAPN3P20807 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.69■□□□□ 0.1
CAPN3P20807 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN3P20807 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CAPN3P20807 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN3P20807 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.69■□□□□ 0.1
CAPN3P20807 AC025062.2-201ENST00000605477 670 ntBASIC15.69■□□□□ 0.1
CAPN3P20807 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN3P20807 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.69■□□□□ 0.1
CAPN3P20807 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CAPN3P20807 AC134684.3-201ENST00000641758 218 ntBASIC15.69■□□□□ 0.1
CAPN3P20807 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CAPN3P20807 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CAPN3P20807 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.69■□□□□ 0.1
CAPN3P20807 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
CAPN3P20807 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CAPN3P20807 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN3P20807 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CAPN3P20807 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 AC004832.2-201ENST00000426397 482 ntBASIC15.68■□□□□ 0.1
CAPN3P20807 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN3P20807 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CAPN3P20807 RNA5SP416-201ENST00000516838 111 ntBASIC15.68■□□□□ 0.1
CAPN3P20807 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.68■□□□□ 0.1
CAPN3P20807 AC034105.1-201ENST00000563488 319 ntBASIC15.68■□□□□ 0.1
CAPN3P20807 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 Z83851.2-201ENST00000609564 659 ntBASIC15.68■□□□□ 0.1
CAPN3P20807 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CAPN3P20807 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.68■□□□□ 0.1
CAPN3P20807 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CAPN3P20807 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms