Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.2■□□□□ 0.5
HOXC6P09630 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 AC133539.2-201ENST00000604757 467 ntBASIC18.2■□□□□ 0.5
HOXC6P09630 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HOXC6P09630 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
HOXC6P09630 AL691432.1-201ENST00000596308 1422 ntBASIC18.2■□□□□ 0.5
HOXC6P09630 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.2■□□□□ 0.5
HOXC6P09630 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 AC093525.8-201ENST00000624099 1342 ntBASIC18.2■□□□□ 0.5
HOXC6P09630 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HOXC6P09630 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HOXC6P09630 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.19■□□□□ 0.5
HOXC6P09630 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 GGT3P-204ENST00000453783 1664 ntBASIC18.19■□□□□ 0.5
HOXC6P09630 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HOXC6P09630 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HOXC6P09630 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC6P09630 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXC6P09630 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HOXC6P09630 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HOXC6P09630 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.19■□□□□ 0.5
HOXC6P09630 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HOXC6P09630 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC6P09630 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC6P09630 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.19■□□□□ 0.5
HOXC6P09630 MIR4538-201ENST00000581377 78 ntBASIC18.19■□□□□ 0.5
HOXC6P09630 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HOXC6P09630 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.19■□□□□ 0.5
HOXC6P09630 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HOXC6P09630 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
HOXC6P09630 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HOXC6P09630 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXC6P09630 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 AC090340.1-201ENST00000620778 4980 ntBASIC18.18■□□□□ 0.5
HOXC6P09630 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HOXC6P09630 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
HOXC6P09630 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
HOXC6P09630 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC6P09630 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HOXC6P09630 MIR1908-201ENST00000410394 80 ntBASIC18.18■□□□□ 0.5
HOXC6P09630 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC18.18■□□□□ 0.5
HOXC6P09630 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.18■□□□□ 0.5
HOXC6P09630 CTBP2P5-201ENST00000454986 1264 ntBASIC18.18■□□□□ 0.5
HOXC6P09630 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXC6P09630 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.18■□□□□ 0.5
HOXC6P09630 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.18■□□□□ 0.5
HOXC6P09630 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC6P09630 CU634019.7-201ENST00000624153 1185 ntBASIC18.18■□□□□ 0.5
HOXC6P09630 FP236241.2-201ENST00000624906 1185 ntBASIC18.18■□□□□ 0.5
HOXC6P09630 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
HOXC6P09630 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
HOXC6P09630 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
HOXC6P09630 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.18■□□□□ 0.5
HOXC6P09630 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HOXC6P09630 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HOXC6P09630 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXC6P09630 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.17■□□□□ 0.5
HOXC6P09630 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HOXC6P09630 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HOXC6P09630 KLF2P4-201ENST00000451959 1225 ntBASIC18.17■□□□□ 0.5
HOXC6P09630 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms