Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM2P07951 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM2P07951 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM2P07951 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TPM2P07951 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.59■□□□□ 0.57
TPM2P07951 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TPM2P07951 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM2P07951 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM2P07951 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TPM2P07951 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TPM2P07951 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM2P07951 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM2P07951 ME2P1-201ENST00000426028 1970 ntBASIC18.59■□□□□ 0.57
TPM2P07951 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TPM2P07951 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.59■□□□□ 0.57
TPM2P07951 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TPM2P07951 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.59■□□□□ 0.57
TPM2P07951 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.58■□□□□ 0.57
TPM2P07951 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TPM2P07951 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM2P07951 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM2P07951 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM2P07951 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM2P07951 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TPM2P07951 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TPM2P07951 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TPM2P07951 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TPM2P07951 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TPM2P07951 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.58■□□□□ 0.57
TPM2P07951 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.58■□□□□ 0.57
TPM2P07951 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.58■□□□□ 0.57
TPM2P07951 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TPM2P07951 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.58■□□□□ 0.56
TPM2P07951 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.58■□□□□ 0.56
TPM2P07951 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.58■□□□□ 0.56
TPM2P07951 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TPM2P07951 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM2P07951 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TPM2P07951 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TPM2P07951 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TPM2P07951 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
TPM2P07951 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.58■□□□□ 0.56
TPM2P07951 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.58■□□□□ 0.56
TPM2P07951 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TPM2P07951 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.57■□□□□ 0.56
TPM2P07951 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 AC026396.1-201ENST00000419388 421 ntBASIC18.57■□□□□ 0.56
TPM2P07951 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.57■□□□□ 0.56
TPM2P07951 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TPM2P07951 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
TPM2P07951 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.57■□□□□ 0.56
TPM2P07951 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPM2P07951 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms