Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AC025048.3-201ENST00000590609 569 ntBASIC19.05■□□□□ 0.64
HLA-DOAP06340 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 AC005702.4-201ENST00000618393 416 ntBASIC19.05■□□□□ 0.64
HLA-DOAP06340 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 REXO1L8P-201ENST00000604378 1897 ntBASIC19.05■□□□□ 0.64
HLA-DOAP06340 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 SLC7A15P-201ENST00000424028 1363 ntBASIC19.05■□□□□ 0.64
HLA-DOAP06340 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DOAP06340 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOAP06340 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 AC138969.3-201ENST00000546612 1459 ntBASIC19.04■□□□□ 0.64
HLA-DOAP06340 AC138932.2-201ENST00000548268 1459 ntBASIC19.04■□□□□ 0.64
HLA-DOAP06340 AC126755.4-201ENST00000549796 1459 ntBASIC19.04■□□□□ 0.64
HLA-DOAP06340 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 TIMM17BP1-201ENST00000545713 516 ntBASIC19.04■□□□□ 0.64
HLA-DOAP06340 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DOAP06340 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOAP06340 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AC080080.1-201ENST00000625121 2420 ntBASIC19.03■□□□□ 0.64
HLA-DOAP06340 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AC022211.2-201ENST00000585075 2527 ntBASIC19.03■□□□□ 0.64
HLA-DOAP06340 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 FTH1-202ENST00000526640 786 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-DOAP06340 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOAP06340 CHCHD2P3-201ENST00000603038 451 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms