Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.41■□□□□ 0.06
MT-ND1P03886 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND1P03886 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND1P03886 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND1P03886 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 SLC22A20-204ENST00000530038 1673 ntBASIC15.41■□□□□ 0.06
MT-ND1P03886 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND1P03886 AC006058.4-201ENST00000624016 1670 ntBASIC15.41■□□□□ 0.06
MT-ND1P03886 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.41■□□□□ 0.06
MT-ND1P03886 CICP13-201ENST00000422015 2789 ntBASIC15.41■□□□□ 0.06
MT-ND1P03886 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MT-ND1P03886 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MT-ND1P03886 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND1P03886 AL009178.2-201ENST00000597278 2719 ntBASIC15.4■□□□□ 0.06
MT-ND1P03886 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND1P03886 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 MIR1224-201ENST00000408193 85 ntBASIC15.4■□□□□ 0.06
MT-ND1P03886 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.4■□□□□ 0.06
MT-ND1P03886 UPK3BP1-201ENST00000428678 509 ntBASIC15.4■□□□□ 0.06
MT-ND1P03886 PMS2P1-201ENST00000431037 1228 ntBASIC15.4■□□□□ 0.06
MT-ND1P03886 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.4■□□□□ 0.06
MT-ND1P03886 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 MIR3652-201ENST00000579335 131 ntBASIC15.4■□□□□ 0.06
MT-ND1P03886 AL732292.2-201ENST00000609649 430 ntBASIC15.4■□□□□ 0.06
MT-ND1P03886 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MT-ND1P03886 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND1P03886 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MT-ND1P03886 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND1P03886 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.4■□□□□ 0.06
MT-ND1P03886 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
MT-ND1P03886 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
MT-ND1P03886 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MT-ND1P03886 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.4■□□□□ 0.06
MT-ND1P03886 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 AC099063.4-201ENST00000641099 1602 ntBASIC15.39■□□□□ 0.05
MT-ND1P03886 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
MT-ND1P03886 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.39■□□□□ 0.05
MT-ND1P03886 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.39■□□□□ 0.05
MT-ND1P03886 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND1P03886 AL121772.3-201ENST00000610840 674 ntBASIC15.39■□□□□ 0.05
MT-ND1P03886 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 AL589182.2-201ENST00000619332 1049 ntBASIC15.39■□□□□ 0.05
MT-ND1P03886 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MT-ND1P03886 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND1P03886 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND1P03886 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.39■□□□□ 0.05
MT-ND1P03886 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MT-ND1P03886 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
MT-ND1P03886 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 AC106881.1-201ENST00000605849 3329 ntBASIC15.38■□□□□ 0.05
MT-ND1P03886 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MT-ND1P03886 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
MT-ND1P03886 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms