Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 KRT18P28-201ENST00000453838 1332 ntBASIC17.01■□□□□ 0.31
TRUB2O95900 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRUB2O95900 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRUB2O95900 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRUB2O95900 HLA-H-201ENST00000383620 1096 ntBASIC17.01■□□□□ 0.31
TRUB2O95900 SPDYE14P-201ENST00000442619 822 ntBASIC17.01■□□□□ 0.31
TRUB2O95900 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.01■□□□□ 0.31
TRUB2O95900 AC109322.1-201ENST00000524499 1264 ntBASIC17.01■□□□□ 0.31
TRUB2O95900 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TRUB2O95900 AC026150.2-201ENST00000564693 1156 ntBASIC17.01■□□□□ 0.31
TRUB2O95900 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.01■□□□□ 0.31
TRUB2O95900 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.01■□□□□ 0.31
TRUB2O95900 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.01■□□□□ 0.31
TRUB2O95900 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
TRUB2O95900 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRUB2O95900 AC112504.1-201ENST00000623415 1841 ntBASIC17■□□□□ 0.31
TRUB2O95900 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 LINC02447-202ENST00000501888 2146 ntBASIC17■□□□□ 0.31
TRUB2O95900 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TRUB2O95900 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TRUB2O95900 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRUB2O95900 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17■□□□□ 0.31
TRUB2O95900 CD81-202ENST00000381036 880 ntTSL 3 BASIC17■□□□□ 0.31
TRUB2O95900 METTL21AP1-201ENST00000438852 635 ntBASIC17■□□□□ 0.31
TRUB2O95900 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17■□□□□ 0.31
TRUB2O95900 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRUB2O95900 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 RARRES2P9-201ENST00000565168 469 ntBASIC17■□□□□ 0.31
TRUB2O95900 AC069224.1-201ENST00000566372 1715 ntBASIC17■□□□□ 0.31
TRUB2O95900 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17■□□□□ 0.31
TRUB2O95900 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17■□□□□ 0.31
TRUB2O95900 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17■□□□□ 0.31
TRUB2O95900 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17■□□□□ 0.31
TRUB2O95900 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17■□□□□ 0.31
TRUB2O95900 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRUB2O95900 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRUB2O95900 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17■□□□□ 0.31
TRUB2O95900 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.99■□□□□ 0.31
TRUB2O95900 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.99■□□□□ 0.31
TRUB2O95900 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRUB2O95900 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.99■□□□□ 0.31
TRUB2O95900 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.99■□□□□ 0.31
TRUB2O95900 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TRUB2O95900 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.99■□□□□ 0.31
TRUB2O95900 RNA5SP410-201ENST00000516285 106 ntBASIC16.99■□□□□ 0.31
TRUB2O95900 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 AP001059.3-201ENST00000619053 235 ntBASIC16.99■□□□□ 0.31
TRUB2O95900 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRUB2O95900 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TRUB2O95900 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.99■□□□□ 0.31
TRUB2O95900 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.99■□□□□ 0.31
TRUB2O95900 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRUB2O95900 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.99■□□□□ 0.31
TRUB2O95900 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.99■□□□□ 0.31
TRUB2O95900 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms