Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.51□□□□□ -0.09
PFDN1O60925 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.51□□□□□ -0.09
PFDN1O60925 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 EGFEM1P-202ENST00000431685 1563 ntBASIC14.51□□□□□ -0.09
PFDN1O60925 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PFDN1O60925 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
PFDN1O60925 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PFDN1O60925 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PFDN1O60925 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.5□□□□□ -0.09
PFDN1O60925 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.5□□□□□ -0.09
PFDN1O60925 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 AC036111.1-201ENST00000533973 1582 ntBASIC14.5□□□□□ -0.09
PFDN1O60925 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.5□□□□□ -0.09
PFDN1O60925 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.5□□□□□ -0.09
PFDN1O60925 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PFDN1O60925 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.5□□□□□ -0.09
PFDN1O60925 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
PFDN1O60925 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 AC079776.2-201ENST00000641154 1609 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 TUBB8P12-201ENST00000308911 1335 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 TUBB7P-202ENST00000428444 1305 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 TUBB8P7-204ENST00000567960 1332 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PFDN1O60925 AC008677.1-201ENST00000519230 1561 ntBASIC14.49□□□□□ -0.09
PFDN1O60925 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PFDN1O60925 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms