Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SMARCA5O60264 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SMARCA5O60264 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SMARCA5O60264 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.04■□□□□ 0.8
SMARCA5O60264 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.04■□□□□ 0.8
SMARCA5O60264 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
SMARCA5O60264 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.04■□□□□ 0.8
SMARCA5O60264 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 RPS8P6-201ENST00000426177 609 ntBASIC20.04■□□□□ 0.8
SMARCA5O60264 GPS2P2-201ENST00000430745 888 ntBASIC20.04■□□□□ 0.8
SMARCA5O60264 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SMARCA5O60264 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.04■□□□□ 0.8
SMARCA5O60264 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.04■□□□□ 0.8
SMARCA5O60264 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.04■□□□□ 0.8
SMARCA5O60264 MIR4321-201ENST00000592276 80 ntBASIC20.04■□□□□ 0.8
SMARCA5O60264 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SMARCA5O60264 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.04■□□□□ 0.8
SMARCA5O60264 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SMARCA5O60264 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SMARCA5O60264 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.04■□□□□ 0.8
SMARCA5O60264 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
SMARCA5O60264 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCA5O60264 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCA5O60264 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 RNA5SP410-201ENST00000516285 106 ntBASIC20.03■□□□□ 0.8
SMARCA5O60264 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 KRT8P23-201ENST00000560090 1207 ntBASIC20.03■□□□□ 0.8
SMARCA5O60264 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.03■□□□□ 0.8
SMARCA5O60264 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCA5O60264 AC084121.4-201ENST00000641598 221 ntBASIC20.03■□□□□ 0.8
SMARCA5O60264 AF228730.8-201ENST00000642140 221 ntBASIC20.03■□□□□ 0.8
SMARCA5O60264 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCA5O60264 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 ABR-203ENST00000536794 2213 ntTSL 2 BASIC20.03■□□□□ 0.8
SMARCA5O60264 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.03■□□□□ 0.8
SMARCA5O60264 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SMARCA5O60264 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCA5O60264 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 HYMAI-201ENST00000635591 3347 ntBASIC20.02■□□□□ 0.8
SMARCA5O60264 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SMARCA5O60264 MIR648-201ENST00000385046 94 ntBASIC20.02■□□□□ 0.8
SMARCA5O60264 PP14571-201ENST00000404327 934 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCA5O60264 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.02■□□□□ 0.8
SMARCA5O60264 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCA5O60264 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.02■□□□□ 0.8
SMARCA5O60264 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SMARCA5O60264 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCA5O60264 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.02■□□□□ 0.8
SMARCA5O60264 AC027612.4-201ENST00000605371 583 ntBASIC20.02■□□□□ 0.8
SMARCA5O60264 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.02■□□□□ 0.8
SMARCA5O60264 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SMARCA5O60264 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.02■□□□□ 0.8
SMARCA5O60264 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms