Protein–RNA interactions for Protein: O15541

RNF113A, RING finger protein 113A, humanhuman

Known RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF113AO15541 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 AL079307.3-201ENST00000556114 283 ntBASIC19.43■□□□□ 0.7
RNF113AO15541 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF113AO15541 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF113AO15541 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF113AO15541 AL589739.1-201ENST00000607720 493 ntBASIC19.43■□□□□ 0.7
RNF113AO15541 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RNF113AO15541 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF113AO15541 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 FO538757.1-201ENST00000623083 1397 ntBASIC19.43■□□□□ 0.7
RNF113AO15541 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF113AO15541 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF113AO15541 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.43■□□□□ 0.7
RNF113AO15541 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
RNF113AO15541 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF113AO15541 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RNF113AO15541 AP001282.1-201ENST00000531301 1499 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF113AO15541 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF113AO15541 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF113AO15541 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 AC004987.2-201ENST00000395959 1148 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF113AO15541 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 SPDYE17-201ENST00000412399 783 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 AC092580.3-201ENST00000430932 139 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF113AO15541 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 AC097493.3-201ENST00000509725 367 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RNF113AO15541 AC243562.2-201ENST00000561247 970 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF113AO15541 AL138828.2-201ENST00000615812 383 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 SPDYE12P-201ENST00000618416 771 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 AC026691.1-201ENST00000602502 2017 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF113AO15541 DOC2GP-204ENST00000639052 2548 ntBASIC19.42■□□□□ 0.7
RNF113AO15541 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF113AO15541 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 BNIP3P1-202ENST00000550043 1585 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 AL513523.2-202ENST00000427283 2040 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF113AO15541 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF113AO15541 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RNF113AO15541 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF113AO15541 RPL37AP1-201ENST00000412502 279 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 HLA-V-204ENST00000476601 1289 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF113AO15541 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF113AO15541 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF113AO15541 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RNF113AO15541 AL390955.2-201ENST00000603032 514 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 AL158211.3-201ENST00000607385 239 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RNF113AO15541 CETN4P-206ENST00000642099 2168 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF113AO15541 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF113AO15541 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF113AO15541 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF113AO15541 AC134407.2-201ENST00000625089 1978 ntBASIC19.41■□□□□ 0.7
RNF113AO15541 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
RNF113AO15541 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF113AO15541 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF113AO15541 AL603832.2-201ENST00000566195 2125 ntBASIC19.4■□□□□ 0.7
RNF113AO15541 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF113AO15541 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF113AO15541 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF113AO15541 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF113AO15541 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF113AO15541 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF113AO15541 AC069224.1-201ENST00000566372 1715 ntBASIC19.4■□□□□ 0.7
RNF113AO15541 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RNF113AO15541 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RNF113AO15541 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
RNF113AO15541 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF113AO15541 AC055876.3-201ENST00000431496 288 ntBASIC19.4■□□□□ 0.7
RNF113AO15541 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF113AO15541 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RNF113AO15541 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF113AO15541 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms