Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 TFAMP1-201ENST00000412727 736 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 AL355306.1-201ENST00000415580 579 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 CEND1P1-201ENST00000451006 455 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 TIMM8BP1-201ENST00000452384 211 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 POU5F1P6-201ENST00000466990 990 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 AL135744.1-201ENST00000565098 629 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 MIR3687-2-201ENST00000577708 61 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 MIR3687-1-201ENST00000614492 61 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.22□□□□□ -0.45
KNCNA6PVL3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KNCNA6PVL3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
KNCNA6PVL3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 REXO1L8P-201ENST00000604378 1897 ntBASIC12.21□□□□□ -0.45
KNCNA6PVL3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.21□□□□□ -0.45
KNCNA6PVL3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KNCNA6PVL3 SPDYE11-202ENST00000450699 704 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms