Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.26■□□□□ 0.03
PRAMEF25A6NGN4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF25A6NGN4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PRAMEF25A6NGN4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 DBET-201ENST00000630918 3363 ntBASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 ELL2P1-201ENST00000413990 1906 ntBASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 AC073347.1-201ENST00000421633 2643 ntBASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 AC092474.2-201ENST00000424288 719 ntBASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 CEND1P1-201ENST00000451006 455 ntBASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRAMEF25A6NGN4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 PRAL-201ENST00000624952 3286 ntBASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 AL355306.1-201ENST00000415580 579 ntBASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 YBX1P5-201ENST00000509441 847 ntBASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 RARRES2P8-201ENST00000566335 367 ntBASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 MIR4469-201ENST00000583919 79 ntBASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRAMEF25A6NGN4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms