Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 SLC7A15P-201ENST00000424028 1363 ntBASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 MEP1AP4-201ENST00000423244 1087 ntBASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 AC055876.2-201ENST00000531834 546 ntBASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 NFIC-211ENST00000641145 8399 ntBASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TBC1D3BA6NDS4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 CYP4F24P-201ENST00000586049 1580 ntBASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 FO393414.2-201ENST00000405153 598 ntBASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 POU5F1P6-201ENST00000466990 990 ntBASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AC011495.1-201ENST00000498085 584 ntBASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 TIMM17BP1-201ENST00000545713 516 ntBASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 AC007431.3-201ENST00000623221 587 ntBASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TBC1D3BA6NDS4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.42■□□□□ 0.22
TBC1D3BA6NDS4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms