Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TOP3BP1-201ENST00000420768 1380 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL355306.1-201ENST00000415580 579 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HCG4-201ENST00000418983 998 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HMGN1P19-201ENST00000436976 333 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RFPL4AP1-201ENST00000530883 850 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC025678.2-201ENST00000562061 970 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC027612.4-201ENST00000605371 583 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL596087.1-201ENST00000400979 1969 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC132872.4-202ENST00000622924 2756 ntBASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TCRBV4S1A1TA0A5B7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HMGA1P7-201ENST00000406908 502 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TFAMP1-201ENST00000412727 736 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AL592309.1-201ENST00000443127 649 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC023141.5-201ENST00000458585 616 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CYMP-203ENST00000474680 1263 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RN7SL589P-201ENST00000481268 310 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC093028.1-201ENST00000622998 982 ntBASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms