Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 AC087499.6-201ENST00000411576 835 ntBASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 AC010336.2-201ENST00000564226 506 ntBASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1G3Q9Y6M4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CSNK1G3Q9Y6M4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AC098614.1-201ENST00000368528 745 ntBASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AL139010.1-201ENST00000454878 894 ntBASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 API5-211ENST00000534695 560 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AL512361.1-201ENST00000554200 418 ntBASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AC140912.1-201ENST00000577171 1054 ntBASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AL033527.5-202ENST00000641632 1098 ntBASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1G3Q9Y6M4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 GGT4P-201ENST00000623672 1708 ntBASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1G3Q9Y6M4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms